H. Pylori: The Hidden Cause of Your Gut Issues (And How to Fix It Naturally)

Do You Have Unexplained Stomach Problems?

If you suffer from bloating, acid reflux, stomach pain, or chronic nausea, you may have an H. pylori infection—and not even know it. This sneaky bacteria is one of the most common yet overlooked causes of gut dysfunction, affecting nearly 50% of the global population. You read that right… 1 out of 2! H. pylori can lead to ulcers, acid reflux, IBS-like symptoms, and even stomach cancer if left untreated. While conventional medicine often treats it with antibiotics, a functional medicine approach focuses on restoring gut balance and eradicating the infection naturally—without destroying your microbiome.

What is H. Pylori?

Helicobacter pylori (H. pylori) is a bacteria that burrows into the lining of the stomach, reducing stomach acid production and triggering chronic inflammation. It spreads easily through contaminated food, water, and even saliva, meaning you may have picked it up without realizing it. The biggest issue? Many people don’t experience symptoms immediately, allowing the infection to silently damage digestion over time.

Common Symptoms of H. Pylori Infection

While some people with H. pylori remain asymptomatic, others develop chronic digestive symptoms, including:

• Persistent bloating and belching
• Acid reflux or heartburn
• Nausea, vomiting, or loss of appetite
• Stomach pain, especially on an empty stomach
• Diarrhea or constipation
• Unexplained weight loss
• Bad breath (even with good hygiene)

Since H. pylori lowers stomach acid, it impairs digestion and can lead to nutrient deficiencies, making gut health worse over time.

How Functional Medicine Treats H. Pylori Naturally

Instead of relying solely on antibiotics—which wipe out both bad and beneficial bacteria—functional medicine takes a holistic approach to eliminate H. pylori while restoring gut health. Here’s how:

Step 1: Get Proper Testing

Most doctors only test for H. pylori when symptoms become severe, but early detection is key. Functional medicine uses:

• H. pylori breath test (detects bacterial activity in the stomach)
• Stool test (identifies H. pylori and other gut imbalances, this one is the most accurate)
• Blood test (checks for antibodies, though not always accurate for active infections)

If you’ve been experiencing persistent digestive issues, getting tested is a crucial first step.

Step 2: Support Stomach Acid & Digestion

H. pylori thrives in a low-acid environment. Since stomach acid is crucial for digestion, restoring it helps combat infection and improve nutrient absorption. Which is also why many clients who have low stomach acid or who are taking medications for heartburn often have a hidden H. Pylori infection. Ways to naturally boost stomach acid:

• Take apple cider vinegar or betaine HCl before meals to improve digestion.
• Avoid drinking excessive water during meals, as it dilutes stomach acid.
• Eat bitter foods like arugula, dandelion greens, and ginger to stimulate acid production.

Step 3: Use Natural Antimicrobials

Certain herbs and supplements can eradicate H. pylori naturally without damaging beneficial gut bacteria:

• Mastic gum – Specifically targets and kills H. pylori bacteria.
• Berberine – A natural antimicrobial that fights gut infections.
• Manuka honey – Contains powerful antibacterial properties.
• Garlic extract – Helps inhibit H. pylori growth and supports the immune system.
• Sulforaphane – promotes healthy detoxification and reduces inflammation
• Saccharomyces boulardii – improves leaky gut and crowds out bad bacteria. 

Step 4: Repair the Gut Lining

H. pylori damages the stomach lining, which can lead to leaky gut, inflammation, and poor digestion. Healing the gut is a crucial part of recovery. Best gut-healing nutrients:

• L-glutamine – Repairs and strengthens the gut lining.
• Aloe vera – Soothes inflammation and promotes healing.
• Collagen peptides – Helps restore the stomach lining.
• Zinc carnosine – Supports stomach lining regeneration.
• IgY Immunoglobulins – help calm down and balance the immune system in the gut.

Step 5: Restore Gut Bacteria Balance

Since H. pylori disrupts the gut microbiome, rebuilding beneficial bacteria is essential.

• Take a high-quality probiotic with Lactobacillus and Bifidobacterium strains or Saccharomyces boulardii.
• Eat fermented foods like kimchi, sauerkraut, and pickled vegetables.
• Reduce processed foods, sugar, and alcohol, which fuel bad bacteria growth.

A Sample Gut-Healing Meal Plan

To help combat H. pylori naturally, here’s a sample 1-day gut-friendly meal plan: Breakfast:  Scrambled eggs with sautéed spinach and avocado. Lunch:  Chicken breast with broccoli fried in butter, salt & pepper. Snack:  Bone broth with turmeric and ginger. Dinner:  Grass-fed beef stir-fry with coconut aminos and cauliflower rice. Eating an anti-inflammatory, nutrient-dense diet supports digestion while avoiding foods that feed H. pylori.

When to Seek Help From Functional Medicine

If you have chronic digestive issues that won’t go away, it’s time to get tested for H. pylori. Ignoring an infection can lead to more serious conditions such as:

• Gastric ulcers (painful sores in the stomach lining)
• Severe acid reflux (GERD)
• Chronic gut inflammation
• Increased risk of stomach cancer

Getting the right treatment early prevents long-term damage and helps restore gut health.

Ready to Heal Your Gut for Good?

H. pylori is more than just a stomach bug—it’s a major disruptor of gut health. If you’ve been struggling with bloating, acid reflux, or digestive discomfort, it’s time to address the root cause. At Twin Oaks Health, we take a functional medicine approach to identify and eliminate H. pylori while restoring gut balance. Book a Free Discovery Call today to start your journey toward lasting relief!